Derive weights for sequences
using Thompson, Higgins, and Gibson method
Use the outline below (a-d) to solve this problem
a) compute pairwise distances between sequences
b) apply UPGMA method to join sequences and consequently the clusters)
c) build phylogenetic tree
d) derive sequence weights
Problem 3 (20pts)
The protein sequence of bacterial species ?B3? was used to blast against swissprot protein database. The query returned significant hits to four other bacterial proteins (B1,B2,B4, B5), and one protein in human genome (H). No other mammalian species have shown presence of protein that is similar to B3. Phylogenetic tree construction by several methods resulted in a tree shown below. Explain the presence of this gene in humans.
Please I need this by 8:00pm April 3!!!!!!!!
This question was answered on: Sep 18, 2020
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